IB Biology · Theme A · A4.1

How new
species
appear.

Natural selection is mathematics. Speciation is geography. Together they make new kinds of organism.

11Sub-topics
34Key terms
SL+HLLevel
EcosystemsLevel of organisation
Why this topic

What this topic answers.

Every sub-topic below feeds at least one of these questions.

Guiding question 1

What is the evidence for evolution?

Guiding question 2

How do analogous and homologous structures exemplify commonality and diversity?

A4.1.1 – A4.1.7 · Standard Level

7 things to lock in.

The required syllabus content for A4.1, in order. Each card is one lesson-sized checkpoint.

A4.1.1

Evolution as change in the heritable characteristics of a population

This definition helps to distinguish Darwinian evolution from Lamarckism. Acquired changes that are not genetic in origin are not regarded as evolution.

A4.1.2

Evidence for evolution from base sequences in DNA or RNA and amino acid sequences in proteins

Sequence data gives powerful evidence of common ancestry.

A4.1.3

Evidence for evolution from selective breeding of domesticated animals and crop plants

Evidence for evolution from selective breeding of domesticated animals and crop plants

A4.1.4

Evidence for evolution from homologous structures

Evidence for evolution from homologous structures

A4.1.5

Convergent evolution as the origin of analogous structures

Convergent evolution as the origin of analogous structures

A4.1.6

Speciation by splitting of pre-existing species

Speciation by splitting of pre-existing species

A4.1.7

Roles of reproductive isolation and differential selection in speciation

Roles of reproductive isolation and differential selection in speciation

A4.1.1 · What evolution is

Change in heritable characteristics.

Evolution is a change in the heritable characteristics of a population over time — not a change in any one individual during its life.

Lamarck (1809)

Inheritance of acquired traits

Lamarck proposed that organisms acquire useful traits during their lifetime (giraffes stretch their necks, blacksmiths build big arms) and pass those traits to offspring. Not supported by genetics — acquired changes in muscle, learning, or behaviour are not inherited.

Darwin & Wallace (1858)

Natural selection on existing variation

Variation already exists in a population (alleles). Nature selects individuals best adapted to survive and reproduce. Their alleles are passed on, changing the population over time. Supported by genetics — the mechanism for inheriting variation is now known.

🧪

Nature of Science · evolution as a theory

Evolution is referred to as a theory because all scientific knowledge is provisional. The theory of evolution by natural selection predicts and explains an enormous range of observations and is unlikely ever to be falsified — but science can't formally prove it true. Theories in science are the strongest knowledge claims we have.

A4.1.2 · Evidence from biomolecules

DNA, RNA, proteins — all agree.

Sequence data gives the strongest possible evidence of common ancestry. Closely related species have nearly identical genes; distant relatives have many more differences.

"If there was any lingering doubt about the evidence from the fossil record, the study of DNA provides the strongest possible proof of our relatedness to all other living things." — Francis Collins, former director NHGRI.

The argument is straightforward: the same genes are present in organisms that have evolved from a common ancestor. Differences accumulate gradually through mutation at roughly constant rates. So the number of sequence differences between two species is a measure of how long ago they shared a common ancestor.

Humans and chimpanzees: ~1.2% of DNA differs. Humans and mice: ~15%. Humans and bananas: ~50%. The numbers fit the predicted pattern of common descent.

A4.1.3 · Evidence from selective breeding

Evolution in human timescales.

Selective breeding is observable evolution — humans choose desirable traits, those traits' alleles increase in frequency, and the population changes rapidly.

Dogs

From wolf to chihuahua in 15,000 years

Canis lupus (grey wolf) was domesticated about 15,000 years ago. Through selective breeding humans have produced the modern variety of dog breeds — from Great Danes to dachshunds. All are still classified as Canis lupus familiaris, but morphologically and behaviourally they are wildly diverged.

Brassica oleracea

One species, six vegetables

Cabbage, broccoli, cauliflower, kale, Brussels sprouts and kohlrabi are all Brassica oleracea. Each was developed from the wild plant by selecting for different traits — terminal buds (cabbage), flowers (broccoli, cauliflower), leaves (kale), lateral buds (Brussels sprouts), stems (kohlrabi). Rapid evolutionary change visible in human history.

A4.1.4 · Evidence from homologous structures

One blueprint, many uses.

Homologous structures are similar in underlying design but adapted for different functions. They reveal common ancestry — and the pentadactyl limb is the canonical example.

The pentadactyl limb — five-fingered limb with a single upper bone (humerus/femur), two lower bones (radius+ulna or tibia+fibula), and a wrist/ankle of small bones leading to five digits — is shared by every tetrapod: mammals, birds, reptiles, amphibians.

If these limbs were designed from scratch for their functions, you wouldn't use the same underlying bone plan. The fact that they all share it argues that they were modified from a common ancestor's pentadactyl limb. A whale flipper has five digits because its ancestor walked.

A4.1.5 · Convergent evolution

Different ancestors, same solution.

Convergent evolution produces analogous structures — same function, different evolutionary origin. The reverse pattern of homology.

Wings are the canonical example. Bats, birds and insects all have wings — but they evolved independently:

No common winged ancestor exists for these three groups. The same selective pressure (the advantages of flight) produced superficially similar but structurally and developmentally different wings. Convergent evolution.

A4.1.6 · Speciation

How new species appear.

Speciation is the splitting of one species into two or more. It is the only way new species have ever appeared.

Speciation is gradual evolutionary change combined with the formation of a reproductive barrier — at some point in the process, the diverged populations can no longer interbreed and produce fertile offspring. They have become separate species.

A4.1.7 · Reproductive isolation

Cut off, selected differently.

Speciation needs two ingredients: reproductive isolation and differential selection. Geographical isolation is the classic route to both.

Worked case · chimpanzees vs bonobos

Roughly 2 million years ago, a single population of apes in central Africa was split by the formation and widening of the Congo River:

  1. The river divided the population into two — north and south of the Congo.
  2. The apes could not cross the river. The two populations were geographically isolated — and therefore reproductively isolated.
  3. Conditions north and south of the river were different — different food, different predators, different competition.
  4. Different selection pressures produced different traits in the two populations.
  5. Over time the populations diverged into two species:
    • Pan troglodytes — common chimpanzee, north of the Congo. More aggressive, more hierarchical.
    • Pan paniscus — bonobo, south of the Congo. Less aggressive, matriarchal, peaceful conflict resolution.

Chimpanzees and bonobos can no longer interbreed in nature. Two species from one, separated by water. A clean example of allopatric (geographic) speciation.

HL extension

Higher Level only.

An extra 4 sub-topics for HL — same syllabus, deeper mechanism.

HL only

Differences and similarities between sympatric and allopatric speciation

Differences and similarities between sympatric and allopatric speciation

HL only

Adaptive radiation as a source of biodiversity

Adaptive radiation as a source of biodiversity

HL only

Barriers to hybridization and sterility of interspecific hybrids as mechanisms for preventing the mixing of alleles between species

Barriers to hybridization and sterility of interspecific hybrids as mechanisms for preventing the mixing of alleles between species

HL only

Abrupt speciation in plants by hybridization and polyploidy

Abrupt speciation in plants by hybridization and polyploidy

A4.1.8 · Sympatric vs allopatric speciation

Two routes to reproductive isolation.

Both produce new species; the difference is whether the diverging populations are in the same place or in different places.

Allopatric

Different places

"Allo" = other; "patric" = homeland. Populations physically separated by a barrier — river, mountain range, ocean. The two populations can't interbreed because they can't meet. Over time, different selection pressures and accumulated mutations diverge them into separate species. Example: chimpanzees vs bonobos.

Sympatric

Same place

"Sym" = same. Populations occupy the same area but are reproductively isolated by behaviour, timing, ecology, or genetics. Harder to imagine, but well-documented in many groups — especially plants (polyploidy) and animals with strong mating preferences.

Two flavours of sympatric isolation

Behavioural

Different mating cues

Eastern and Western meadowlarks — their geographic ranges overlap, and they're capable of interbreeding. But each uses a different song to attract mates. Songs determine breeding partners, and the two never reproduce. Two species, same place, behaviourally isolated.

Temporal

Different breeding times

Periodical cicadas — some species emerge to breed every 13 years; others every 17 years. They live in the same forests but rarely meet as adults. Their adult-emergence cycles are temporal barriers to interbreeding.

A4.1.9 · Adaptive radiation

One species → many, fast.

When a single ancestor enters a region with many empty niches, rapid diversification can produce a burst of new species — adaptive radiation.

Darwin's finches are the textbook example. A single ancestral seed-eating finch reached the Galápagos Islands. Each island offered different food sources and habitats with no existing finch competition. Populations adapted to seed-cracking, insect-eating, cactus-eating, tool use, blood-drinking. The result: at least 18 species of finch in the Galápagos archipelago today, all descended from one ancestor.

Adaptive radiation produces divergent evolution and dramatically increases biodiversity — fast — wherever vacant niches are available for a colonising lineage to fill.

A4.1.10 · Barriers to hybridization

Why the alleles stay separate.

Reproductive barriers between species can act before fertilisation (prezygotic) or after (postzygotic). Together, they keep species' gene pools separate.

Prezygotic barriers (before fertilisation)

Behavioural

Courtship

Different songs, displays, pheromones. Individuals don't mate with the wrong species.

Temporal

Timing

Different breeding seasons or different times of day for mating activity.

Ecological

Habitat

Species occupy different habitats within an area and rarely encounter each other.

Mechanical

Anatomy

Physical differences in reproductive structures prevent successful mating.

Postzygotic barriers (after fertilisation)

1

Hybrid inviability

An embryo forms but doesn't survive to become a sexually mature adult.

2

Hybrid infertility

Hybrid lives, but cannot produce functioning gametes. Mules (horse × donkey) — sterile because horses and donkeys have different chromosome numbers; meiosis fails.

3

Hybrid breakdown

F1 hybrids reproduce, but their offspring are inviable or infertile. Effective at preventing gene mixing after one generation.

A4.1.11 · Abrupt speciation by polyploidy

A new species in one generation.

In plants, polyploidy (extra sets of chromosomes) can produce instant speciation — a new organism with a different karyotype that can't interbreed with its parent species.

How polyploidy happens

During meiosis, non-disjunction can produce gametes containing two full sets of chromosomes instead of one. If such a gamete fuses with a normal haploid gamete → triploid (3n). If two diploid gametes fuse → tetraploid (4n).

Why even-ploidy species can persist

  • Even-ploidy plants (4n, 6n, 8n…) can reproduce sexually. Chromosomes still pair as homologous pairs during meiosis. Reproductively isolated from the original 2n parent — instant new species.
  • Odd-ploidy plants (3n, 5n, 7n…) are usually sterile. Meiosis fails because some chromosomes have no homologous partner. Many reproduce asexually instead.

Example: the genus Persicaria (knotweeds/smartweeds) contains many polyploid species — P. maculosa is tetraploid (4n), P. nepalensis is octoploid (8n) — all descended through polyploid speciation events. Polyploid plants often produce bigger fruit, which is why many crop species (wheat, cotton, strawberry, banana) are polyploid.

HL-only key terms

Sympatric SpeciationAllopatric SpeciationGeographical IsolationBehavioural IsolationTemporal IsolationBiodiversityNicheAdaptive RadiationDivergent EvolutionHybridizationHybridPrezygotic BarriersPostzygotic BarriersSterileHybrid InviabilityHybrid InfertilityHybrid BreakdownPolyploidyTriploidTetraploid
Vocabulary

14 terms to own.

If you can't define one of these in a sentence, that's where to revise next.

EvolutionTheoryHomologous StructuresSelective BreedingCommon AncestorPentadactyl LimbPopulationConvergent EvolutionAnalogous StructuresSpeciationSpeciesExtinctionReproductive IsolationGeographical Isolation

IB Linking Questions

“How does the theory of evolution by natural selection predict and explain the unity and diversity of life on Earth?”

“What counts as strong evidence in biology?”